Nonlinear dynamics of the peroxidase-oxidase reaction. II. Compatibility of an extended model with previously reported model-data correspondences

Article Abstract:

A recently proposed model of the peroxidase-oxidase reaction, which derives from an earlier scheme through the addition of NADH oxidation by superoxide anion orbits protonated form, hydroperoxly radical is presented. This model was introduced to replace the reduction of coIII by NAD radicals, a reaction for which there is no direct evidence, with the corresponding reaction involving NAD2.

Oxidases, Chemical reactions, Chemical properties

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An initio molecular dynamics of the green fluorescent protein (GFP) chromophore: an insight into the photoinduced dynamics of green fluorescent proteins

Article Abstract:

An ab initio molecular dynamics study of the chromophore of green fluorescent protein (GFP) in the four relevant protonation states is presented. The result shows the correlation between vibrational frequencies and optical absorption wavelengths of the GFP chromophore, observed upon mutations of its environment.

Usage, Molecular dynamics, Chromophores

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Resonance Raman scattering by the green fluorescent protein and an analogue of its chromophore

Article Abstract:

Spectroscopic studies were done to examine the protonation and excitation dynamics of green fluorescent protein (GFP), the electronic, resonance Raman. Substantial differences are observed between the resonance Raman spectra of GFP and the 4-hydroxybenzylidene-2,3-dimethyl-imidazolinone (HBDI).

Raman effect, Structure

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